Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015920911.1_cds_XP_016469970.1_62465
CDS Infomation

[gene=LOC107792285] [db_xref=GeneID:107792285] [protein=sorting nexin 2B-like isoform X2] [protein_id=XP_016469970.1] [location=complement(join(16106..16150,16543..16629,19417..19677,20992..21201,21668..22639))] [gbkey=CDS]
Sequence

ATGATGGGCGAAGAAGGTCGGAAAGAAGCAATGGAGAGTCTATCTCTTGACGACGATGAC
GACGATAACAAATCGACGTCCAAATCCTACTCTAATTACCGAAGTGCCATGACTTCCCTT
TCCGATTCCCACCATCCTCTCTCCCCGTCAGTCGTCGCTACACCTGCCGATTCCGATCCC
TTGTCTGAAACTTCCTCTATTCAACCCCCTTCTCCTTATGCCGACATTGTTGAAGAACAT
AACGGCATCCAAAACCCTAACGACGACTCGACAATGCCGGAGATACCTCCCTCTTTAAAC
TTGGAGTATTTGAATATCACGGTTTCAGATCCGCACAAGGAAATGGAATCGGGGTCAATT
GTTCCCGGCAGTAATACTTACGTTACCTACTTAATCACTACGAAAACCAATTTACCCGAT
TACGGAGGATCCGATTTCAGCGTTCGGAGACGGTTCAAAGACGTGGTTACGTTATCGGAT
CGATTGAGCGAAGGTTACAGAGGGTATTTCATTCCTCCGAGGCCAGATAAGAGTGTAGTG
GAGAGTCAAGTGATGCAAAAGCAAGAGTTCGTGGAGCAGAGAAGATCCGCACTGGAGAAG
TACTTGCAGAAGCTTGCATCACATCCGGTGATCAAGAAGAGTGATGAATTGAGAGTGTTT
TTGCAGGTGGACGGTAATCTTCCTTTGCCTACGACCACTGATGTGGCATCTAGGGTTTTG
GATGGAGCAGTGAAGTTGCCCAAGCAGTTGTTCGGAGGGGACTCAGGGGGGAATGTGATT
GGGCCGCAGGATGTTGTGCAACCCGCTAAAGGTGGCAGGGATTTGCTGAGGTTGTTCAAG
GAGTTGAAGCAGTCTGTTGCGAATGATTGGGGCGGGTCAAAGTCACTTGTGGAGGAGGAG
GATAAGGATTTCCAGGAAAAGAAACAGCGGTTGCAAAATCTTGAGCTGCAACTAAGTAAT
GCATCAAAACAGGCCGAATTACTCGTGAAAGCTCAGCAAGATATGGGGGAGACGATTGGA
GAACTGGGGCTAACATTTATTAAGTTGACGAAATTTGAGAATGAGCGAGCTACGTTGAGC
TCTCAGAGAGAACGCGCAGCTGATATGAAAAATGTGGCTACTGTGGCTGTTAAAGCTAGC
AGATTGTATCGGGAGTTGAATTCACAGACAGTGAAGCATTTGGATATTCTACACGAACAC
CTGAGTTTAATGTTGGGCGTACACCATGCATTTTCAGACCGGTCAAGTGCTTTATTGACA
GTGCAGACTCTCATTTCGGAATTGTCTTCTTTAAGTTCAAGAGCAGAGAAACTTGAAACA
GCAACTTCTAAGATATTTGGAGGTGATAAATCAAGAGTTCGAAAGTCGGAAGAGTTAAAA
GATGCCATTAGGGTCACTGAAGATGCCAAAAGCTGTGCCATCAGAGAATATGAGCGCATT
AAGGAGAGTAATCGAAGTGAGATAGATAGAATAAATAGAGAAAGGCATGCTGACTTTGTG
AAGATGTTGAAAGGATTCATAACTAATCAGTGCACCAGCAAGGAATCATGGAGGGAGGTG
CAACTAAAAGTCTAG

Peptide Sequence

PEP ID

XP_016469970.1
PEP Infomation

PREDICTED: sorting nexin 2B-like isoform X2 [Nicotiana tabacum]
Sequence

MMGEEGRKEAMESLSLDDDDDDNKSTSKSYSNYRSAMTSLSDSHHPLSPSVVATPADSDP
LSETSSIQPPSPYADIVEEHNGIQNPNDDSTMPEIPPSLNLEYLNITVSDPHKEMESGSI
VPGSNTYVTYLITTKTNLPDYGGSDFSVRRRFKDVVTLSDRLSEGYRGYFIPPRPDKSVV
ESQVMQKQEFVEQRRSALEKYLQKLASHPVIKKSDELRVFLQVDGNLPLPTTTDVASRVL
DGAVKLPKQLFGGDSGGNVIGPQDVVQPAKGGRDLLRLFKELKQSVANDWGGSKSLVEEE
DKDFQEKKQRLQNLELQLSNASKQAELLVKAQQDMGETIGELGLTFIKLTKFENERATLS
SQRERAADMKNVATVAVKASRLYRELNSQTVKHLDILHEHLSLMLGVHHAFSDRSSALLT
VQTLISELSSLSSRAEKLETATSKIFGGDKSRVRKSEELKDAIRVTEDAKSCAIREYERI
KESNRSEIDRINRERHADFVKMLKGFITNQCTSKESWREVQLKV

Transcript Sequence

Gene sequence data has not been registered.